Online databases

Pritzker Research Library

 

 

 

 

 

Pritzker Library interior

Updated 10/11/13

We always appreciate reports of links that no longer work, or of sites that you find particularly useful. Please send to: pemurphy@luriechildrens.org.

-A-

AREX: Arabidopsis Gene Expression Database

Arrowsmith: Linking documents, disciplines, investigators and databases

-B-

BindingDB: Measured binding affinities for biomolecules and synthetic compounds

BioCyc Database Collection: Pathway/genome databases

Biological Magnetic Resonance Data Bank

BioModels Database: Mathematical models of biological interest

Biosystems Database: Pathways or diseases that interact in a biological system

BioToolKit: Online molecular biology and neuroinformatics resources

Biozon: Holdings of disparate molecular biology databases for ease of searching

-C-

Cancer Immunome Database: Antigens from abnormal cells

Carcinogen Potency Database

CarpeDB: Genes linked to epilepsy

Cell Centered Database: Cellular imaging data

Cold Spring Harbor Protocols

Comparative Toxigenomics Database: Interactions between chemicals and genes

Consensus CDS Database: Core set of human protein coding regions

COSMIC: Noninherited cancer mutations

Countway Library of Medicine BioResearch

CREB Target Gene Database

Crystallography Open Database: Searchable crystal structure database

Cytochrome P450 Database

-D-

Databases on Medicine and Molecular Biology

dbMHC: Major Histocompatibility Complex database

DOLOP: A Database of Bacterial Lipoproteins

DrugBank: Combines drug and data with drug target information

-E-

Elemental Data Index: NIST Physics Laboratory online data

Entrez, The Life Sciences Search Engine (search across databases)

-G-

GEISHA: A chicken embryo gene expression database

GeMCRIS: Genetic Modification Clinical Research Information System

GenBank

GeneCards: Database of human genes

GeneTests: Laboratory and clinic directories; educational resources

Genetics Home Reference: Consumer information

GeneXPress: Parsing microarray data

Genetic Association Database: Human genetic associations

GermOnline: Microarray data

Germplasm Resources Information Network: Germplasm resources

GOLD: Genomes OnLine Database: Complete and ongoing genome projects

GPCRDB: Information System for G Protein-coupled Receptors

-H-

HuGE Navigator: Integrated, searchable knowledge base of genetic associations and human genome epidemiology

Human Gene Mutation Database

-L-

Lipid Bank

LIPID MAPS: Lipid Metabolites and Pathways Strategy

-M-

MedlinePlus: Consumer information

MEROPS: Peptidase database

molmovdb.org: Database of Macromolecular Movements

Mouse Genome Informatics from the Jackson Laboratory

Mouse Phenome Database: Phenotypic and genotypic data for the laboratory mouse

Mouse Proteome Project

-O-

Online Mendelian Inheritance in Man (OMIM)

OrphaNet: Rare diseases

Ovarian Kaleidoscope Database: Genes expressed in the ovary

-P-

Patents search (USPTO) 

PenBase: Penaeidin Database 

PhenomicDB: Phenotype-genotype database

PhosphoSite: In vivo phosphorylation sites

Plasma Proteome Database

PRIDE: PRoteomics IDEntification database

ProteinDBS: Protein DataBase Search Engine

PubChem: Chemical structures of small organic molecules

PubMed: Medline, the world's largest biomedical literature database

-R-

RNAi Database: RNA interference studies 

-S-

ScienceWatch: Tracking trends and performance in basic research

snoRNA-LBME-db: Small nucleolar RNA

Stanford Microarray Database

Stem Cells Portal: Sharing information about human embryonic stem cells (registration required)

-T-

Textpresso: An information retrieval and extraction system for biological literature

T1DBase: Genes implicated in Type 1 Diabetes

Toxic Substances Portal: From the Agency for Toxic Substances and Disease Registry

Transterm: RNA sequences and associated motifs

-V-

 ViPR: Virus Pathogen Resource

-Z-

ZINC: Database of small molecules